Protein–RNA interactions for Protein: Q3UA16

Spc25, Kinetochore protein Spc25, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spc25Q3UA16 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Spc25Q3UA16 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Spc25Q3UA16 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Spc25Q3UA16 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Spc25Q3UA16 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Spc25Q3UA16 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Spc25Q3UA16 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Spc25Q3UA16 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Spc25Q3UA16 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Spc25Q3UA16 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Spc25Q3UA16 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Spc25Q3UA16 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.34■■□□□ 1.17
Spc25Q3UA16 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.34■■□□□ 1.17
Spc25Q3UA16 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Spc25Q3UA16 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.33■■□□□ 1.17
Spc25Q3UA16 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.33■■□□□ 1.17
Spc25Q3UA16 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Spc25Q3UA16 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Spc25Q3UA16 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
Spc25Q3UA16 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.32■■□□□ 1.16
Spc25Q3UA16 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Spc25Q3UA16 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Spc25Q3UA16 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.3■■□□□ 1.16
Spc25Q3UA16 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Spc25Q3UA16 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Spc25Q3UA16 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Spc25Q3UA16 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Spc25Q3UA16 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Spc25Q3UA16 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Spc25Q3UA16 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Spc25Q3UA16 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Spc25Q3UA16 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Spc25Q3UA16 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Spc25Q3UA16 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Spc25Q3UA16 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Spc25Q3UA16 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Spc25Q3UA16 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Spc25Q3UA16 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
Spc25Q3UA16 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Spc25Q3UA16 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Spc25Q3UA16 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Spc25Q3UA16 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Spc25Q3UA16 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Spc25Q3UA16 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Spc25Q3UA16 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Spc25Q3UA16 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Spc25Q3UA16 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Spc25Q3UA16 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Spc25Q3UA16 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Spc25Q3UA16 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Spc25Q3UA16 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Spc25Q3UA16 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
Spc25Q3UA16 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Spc25Q3UA16 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Spc25Q3UA16 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Spc25Q3UA16 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Spc25Q3UA16 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Spc25Q3UA16 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Spc25Q3UA16 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Spc25Q3UA16 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Spc25Q3UA16 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Spc25Q3UA16 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.08■■□□□ 1.13
Spc25Q3UA16 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Spc25Q3UA16 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Spc25Q3UA16 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Spc25Q3UA16 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Spc25Q3UA16 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Spc25Q3UA16 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.04■■□□□ 1.12
Spc25Q3UA16 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
Spc25Q3UA16 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms