Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Uba52P62984 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Uba52P62984 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Uba52P62984 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.08■□□□□ 0.97
Uba52P62984 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Uba52P62984 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Uba52P62984 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.07■□□□□ 0.96
Uba52P62984 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.07■□□□□ 0.96
Uba52P62984 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Uba52P62984 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.06■□□□□ 0.96
Uba52P62984 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.06■□□□□ 0.96
Uba52P62984 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Uba52P62984 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Uba52P62984 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Uba52P62984 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.04■□□□□ 0.96
Uba52P62984 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Uba52P62984 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba52P62984 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Uba52P62984 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.01■□□□□ 0.95
Uba52P62984 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Uba52P62984 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uba52P62984 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Uba52P62984 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Uba52P62984 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Uba52P62984 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba52P62984 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba52P62984 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Uba52P62984 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba52P62984 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Uba52P62984 Mipep-204ENSMUST00000225043 1548 ntBASIC20.97■□□□□ 0.95
Uba52P62984 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Uba52P62984 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Uba52P62984 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Uba52P62984 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uba52P62984 Gm45855-201ENSMUST00000212546 880 ntBASIC20.95■□□□□ 0.94
Uba52P62984 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uba52P62984 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.94■□□□□ 0.94
Uba52P62984 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Uba52P62984 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Uba52P62984 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba52P62984 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba52P62984 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uba52P62984 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uba52P62984 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Uba52P62984 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Uba52P62984 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uba52P62984 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uba52P62984 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.9■□□□□ 0.94
Uba52P62984 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Uba52P62984 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.89■□□□□ 0.93
Uba52P62984 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uba52P62984 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uba52P62984 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uba52P62984 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uba52P62984 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uba52P62984 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uba52P62984 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uba52P62984 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uba52P62984 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uba52P62984 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Uba52P62984 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uba52P62984 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Uba52P62984 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Uba52P62984 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Uba52P62984 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Uba52P62984 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Uba52P62984 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Uba52P62984 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uba52P62984 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Uba52P62984 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Uba52P62984 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Uba52P62984 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uba52P62984 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.8■□□□□ 0.92
Uba52P62984 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Uba52P62984 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Uba52P62984 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uba52P62984 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Uba52P62984 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.78■□□□□ 0.92
Uba52P62984 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Uba52P62984 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Uba52P62984 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uba52P62984 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Uba52P62984 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uba52P62984 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Uba52P62984 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Uba52P62984 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Uba52P62984 Gm9397-201ENSMUST00000200125 605 ntBASIC20.75■□□□□ 0.91
Uba52P62984 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.75■□□□□ 0.91
Uba52P62984 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Uba52P62984 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Uba52P62984 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Uba52P62984 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Uba52P62984 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uba52P62984 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Uba52P62984 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Uba52P62984 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uba52P62984 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uba52P62984 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.72■□□□□ 0.91
Uba52P62984 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba52P62984 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms