Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.38■■□□□ 1.01
GdnfP48540 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.37■■□□□ 1.01
GdnfP48540 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.37■■□□□ 1.01
GdnfP48540 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GdnfP48540 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.35■■□□□ 1.01
GdnfP48540 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
GdnfP48540 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
GdnfP48540 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
GdnfP48540 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GdnfP48540 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GdnfP48540 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GdnfP48540 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GdnfP48540 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GdnfP48540 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GdnfP48540 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.32■■□□□ 1
GdnfP48540 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
GdnfP48540 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.31■■□□□ 1
GdnfP48540 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.31■■□□□ 1
GdnfP48540 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GdnfP48540 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
GdnfP48540 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
GdnfP48540 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GdnfP48540 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GdnfP48540 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GdnfP48540 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
GdnfP48540 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.29■■□□□ 1
GdnfP48540 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GdnfP48540 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GdnfP48540 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GdnfP48540 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GdnfP48540 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.28■■□□□ 1
GdnfP48540 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
GdnfP48540 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GdnfP48540 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.27■□□□□ 0.99
GdnfP48540 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
GdnfP48540 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GdnfP48540 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GdnfP48540 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GdnfP48540 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GdnfP48540 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
GdnfP48540 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GdnfP48540 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GdnfP48540 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.25■□□□□ 0.99
GdnfP48540 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
GdnfP48540 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GdnfP48540 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GdnfP48540 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GdnfP48540 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GdnfP48540 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
GdnfP48540 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
GdnfP48540 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GdnfP48540 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GdnfP48540 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
GdnfP48540 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GdnfP48540 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
GdnfP48540 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
GdnfP48540 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GdnfP48540 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GdnfP48540 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GdnfP48540 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GdnfP48540 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GdnfP48540 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GdnfP48540 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GdnfP48540 Gm16148-201ENSMUST00000119653 893 ntBASIC21.17■□□□□ 0.98
GdnfP48540 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GdnfP48540 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.16■□□□□ 0.98
GdnfP48540 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GdnfP48540 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.16■□□□□ 0.98
GdnfP48540 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GdnfP48540 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GdnfP48540 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GdnfP48540 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GdnfP48540 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GdnfP48540 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GdnfP48540 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GdnfP48540 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GdnfP48540 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GdnfP48540 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
GdnfP48540 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GdnfP48540 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GdnfP48540 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
GdnfP48540 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GdnfP48540 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GdnfP48540 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GdnfP48540 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GdnfP48540 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GdnfP48540 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GdnfP48540 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GdnfP48540 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GdnfP48540 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GdnfP48540 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.08■□□□□ 0.96
GdnfP48540 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GdnfP48540 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GdnfP48540 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
GdnfP48540 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
GdnfP48540 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GdnfP48540 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
GdnfP48540 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
GdnfP48540 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
GdnfP48540 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms