Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.11■□□□□ 0.81
Timp3P39876 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Timp3P39876 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Timp3P39876 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Timp3P39876 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Timp3P39876 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Timp3P39876 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Timp3P39876 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Timp3P39876 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Timp3P39876 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Timp3P39876 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Timp3P39876 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Timp3P39876 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Timp3P39876 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Timp3P39876 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Timp3P39876 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.05■□□□□ 0.8
Timp3P39876 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Timp3P39876 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Timp3P39876 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Timp3P39876 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Timp3P39876 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Timp3P39876 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Timp3P39876 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Timp3P39876 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Timp3P39876 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Timp3P39876 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Timp3P39876 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Timp3P39876 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.01■□□□□ 0.79
Timp3P39876 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Timp3P39876 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Timp3P39876 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Timp3P39876 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Timp3P39876 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Timp3P39876 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Timp3P39876 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Timp3P39876 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Timp3P39876 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Timp3P39876 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Timp3P39876 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Timp3P39876 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Timp3P39876 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Timp3P39876 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Timp3P39876 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Timp3P39876 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Timp3P39876 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Timp3P39876 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Timp3P39876 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Timp3P39876 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Timp3P39876 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.94■□□□□ 0.78
Timp3P39876 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.94■□□□□ 0.78
Timp3P39876 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Timp3P39876 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.93■□□□□ 0.78
Timp3P39876 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Timp3P39876 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Timp3P39876 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Timp3P39876 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Timp3P39876 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Timp3P39876 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Timp3P39876 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Timp3P39876 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.9■□□□□ 0.78
Timp3P39876 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Timp3P39876 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Timp3P39876 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Timp3P39876 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Timp3P39876 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Timp3P39876 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Timp3P39876 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Timp3P39876 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Timp3P39876 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Timp3P39876 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Timp3P39876 Gm8503-201ENSMUST00000118131 455 ntBASIC19.87■□□□□ 0.77
Timp3P39876 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Timp3P39876 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Timp3P39876 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Timp3P39876 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Timp3P39876 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Timp3P39876 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timp3P39876 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timp3P39876 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Timp3P39876 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Timp3P39876 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Timp3P39876 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Timp3P39876 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Timp3P39876 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Timp3P39876 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.82■□□□□ 0.76
Timp3P39876 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Timp3P39876 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.81■□□□□ 0.76
Timp3P39876 Gm6821-201ENSMUST00000107540 542 ntBASIC19.81■□□□□ 0.76
Timp3P39876 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timp3P39876 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Timp3P39876 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.8■□□□□ 0.76
Timp3P39876 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timp3P39876 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.8■□□□□ 0.76
Timp3P39876 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Timp3P39876 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Timp3P39876 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timp3P39876 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Timp3P39876 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Timp3P39876 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Timp3P39876 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms