Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf8P32972 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Tnfsf8P32972 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf8P32972 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tnfsf8P32972 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfsf8P32972 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfsf8P32972 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfsf8P32972 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.26■□□□□ 0.83
Tnfsf8P32972 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.25■□□□□ 0.83
Tnfsf8P32972 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf8P32972 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf8P32972 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf8P32972 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfsf8P32972 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf8P32972 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tnfsf8P32972 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf8P32972 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfsf8P32972 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfsf8P32972 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Tnfsf8P32972 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tnfsf8P32972 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Tnfsf8P32972 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfsf8P32972 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf8P32972 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf8P32972 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfsf8P32972 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.2■□□□□ 0.82
Tnfsf8P32972 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tnfsf8P32972 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf8P32972 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf8P32972 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf8P32972 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf8P32972 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf8P32972 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf8P32972 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf8P32972 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.15■□□□□ 0.82
Tnfsf8P32972 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf8P32972 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.15■□□□□ 0.82
Tnfsf8P32972 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf8P32972 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf8P32972 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.13■□□□□ 0.81
Tnfsf8P32972 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf8P32972 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf8P32972 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf8P32972 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.12■□□□□ 0.81
Tnfsf8P32972 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfsf8P32972 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfsf8P32972 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfsf8P32972 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Tnfsf8P32972 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfsf8P32972 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.09■□□□□ 0.81
Tnfsf8P32972 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.09■□□□□ 0.81
Tnfsf8P32972 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfsf8P32972 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfsf8P32972 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfsf8P32972 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tnfsf8P32972 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfsf8P32972 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf8P32972 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf8P32972 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.03■□□□□ 0.8
Tnfsf8P32972 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf8P32972 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfsf8P32972 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfsf8P32972 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfsf8P32972 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfsf8P32972 Gm24804-201ENSMUST00000174982 85 ntBASIC20■□□□□ 0.79
Tnfsf8P32972 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Tnfsf8P32972 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20■□□□□ 0.79
Tnfsf8P32972 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Tnfsf8P32972 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfsf8P32972 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfsf8P32972 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Tnfsf8P32972 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfsf8P32972 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf8P32972 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf8P32972 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf8P32972 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf8P32972 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tnfsf8P32972 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tnfsf8P32972 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfsf8P32972 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.96■□□□□ 0.79
Tnfsf8P32972 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Tnfsf8P32972 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfsf8P32972 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfsf8P32972 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Tnfsf8P32972 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf8P32972 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf8P32972 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfsf8P32972 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfsf8P32972 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Tnfsf8P32972 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf8P32972 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf8P32972 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf8P32972 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf8P32972 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfsf8P32972 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf8P32972 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnfsf8P32972 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf8P32972 Gm16148-201ENSMUST00000119653 893 ntBASIC19.9■□□□□ 0.78
Tnfsf8P32972 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf8P32972 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.89■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms