Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Tuba1bP05213 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Tuba1bP05213 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.63■■□□□ 1.21
Tuba1bP05213 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.63■■□□□ 1.21
Tuba1bP05213 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.63■■□□□ 1.21
Tuba1bP05213 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tuba1bP05213 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tuba1bP05213 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tuba1bP05213 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tuba1bP05213 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tuba1bP05213 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.61■■□□□ 1.21
Tuba1bP05213 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Tuba1bP05213 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tuba1bP05213 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tuba1bP05213 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tuba1bP05213 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Tuba1bP05213 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tuba1bP05213 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Tuba1bP05213 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tuba1bP05213 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Tuba1bP05213 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
Tuba1bP05213 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Tuba1bP05213 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Tuba1bP05213 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.53■■□□□ 1.2
Tuba1bP05213 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tuba1bP05213 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tuba1bP05213 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Tuba1bP05213 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tuba1bP05213 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tuba1bP05213 Gm16148-201ENSMUST00000119653 893 ntBASIC22.51■■□□□ 1.19
Tuba1bP05213 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tuba1bP05213 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tuba1bP05213 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tuba1bP05213 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tuba1bP05213 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.49■■□□□ 1.19
Tuba1bP05213 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Tuba1bP05213 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tuba1bP05213 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tuba1bP05213 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tuba1bP05213 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tuba1bP05213 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tuba1bP05213 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tuba1bP05213 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tuba1bP05213 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tuba1bP05213 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tuba1bP05213 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tuba1bP05213 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Tuba1bP05213 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tuba1bP05213 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tuba1bP05213 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tuba1bP05213 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Tuba1bP05213 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tuba1bP05213 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Tuba1bP05213 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tuba1bP05213 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tuba1bP05213 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Tuba1bP05213 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Tuba1bP05213 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.39■■□□□ 1.17
Tuba1bP05213 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Tuba1bP05213 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tuba1bP05213 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tuba1bP05213 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tuba1bP05213 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Tuba1bP05213 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Tuba1bP05213 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tuba1bP05213 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.35■■□□□ 1.17
Tuba1bP05213 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Tuba1bP05213 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tuba1bP05213 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tuba1bP05213 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tuba1bP05213 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tuba1bP05213 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tuba1bP05213 Zfp131-205ENSMUST00000223812 663 ntBASIC22.33■■□□□ 1.17
Tuba1bP05213 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tuba1bP05213 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tuba1bP05213 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tuba1bP05213 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.32■■□□□ 1.16
Tuba1bP05213 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tuba1bP05213 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tuba1bP05213 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tuba1bP05213 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Tuba1bP05213 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tuba1bP05213 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Tuba1bP05213 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Tuba1bP05213 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tuba1bP05213 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tuba1bP05213 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Tuba1bP05213 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tuba1bP05213 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tuba1bP05213 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tuba1bP05213 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tuba1bP05213 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Tuba1bP05213 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tuba1bP05213 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tuba1bP05213 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Tuba1bP05213 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tuba1bP05213 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tuba1bP05213 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tuba1bP05213 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.25■■□□□ 1.15
Tuba1bP05213 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms