Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P04224 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.35■■□□□ 1.01
P04224 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
P04224 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
P04224 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
P04224 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
P04224 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.31■■□□□ 1
P04224 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
P04224 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
P04224 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
P04224 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.3■■□□□ 1
P04224 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04224 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P04224 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.28■■□□□ 1
P04224 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.28■■□□□ 1
P04224 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.28■■□□□ 1
P04224 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.28■■□□□ 1
P04224 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
P04224 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.26■□□□□ 0.99
P04224 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
P04224 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04224 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.25■□□□□ 0.99
P04224 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
P04224 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04224 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04224 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.24■□□□□ 0.99
P04224 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04224 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
P04224 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
P04224 Gm27322-201ENSMUST00000184007 104 ntBASIC21.23■□□□□ 0.99
P04224 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.22■□□□□ 0.99
P04224 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P04224 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04224 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P04224 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.21■□□□□ 0.99
P04224 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P04224 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.2■□□□□ 0.98
P04224 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.2■□□□□ 0.98
P04224 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P04224 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.19■□□□□ 0.98
P04224 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P04224 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
P04224 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P04224 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04224 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P04224 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04224 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
P04224 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.16■□□□□ 0.98
P04224 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P04224 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P04224 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P04224 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P04224 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
P04224 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
P04224 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P04224 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P04224 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
P04224 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
P04224 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
P04224 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
P04224 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
P04224 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P04224 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
P04224 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P04224 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
P04224 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
P04224 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P04224 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P04224 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.1■□□□□ 0.97
P04224 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P04224 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04224 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04224 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04224 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04224 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P04224 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
P04224 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
P04224 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
P04224 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P04224 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
P04224 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P04224 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
P04224 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.06■□□□□ 0.96
P04224 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.05■□□□□ 0.96
P04224 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04224 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04224 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04224 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04224 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04224 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P04224 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
P04224 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04224 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04224 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P04224 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04224 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04224 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04224 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04224 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.02■□□□□ 0.96
P04224 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms