Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CfdP03953 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CfdP03953 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CfdP03953 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.8■□□□□ 0.92
CfdP03953 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CfdP03953 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CfdP03953 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CfdP03953 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CfdP03953 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CfdP03953 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CfdP03953 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CfdP03953 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CfdP03953 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.76■□□□□ 0.91
CfdP03953 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CfdP03953 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CfdP03953 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CfdP03953 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CfdP03953 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CfdP03953 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CfdP03953 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CfdP03953 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CfdP03953 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CfdP03953 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CfdP03953 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CfdP03953 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.69■□□□□ 0.9
CfdP03953 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CfdP03953 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
CfdP03953 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CfdP03953 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.67■□□□□ 0.9
CfdP03953 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CfdP03953 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CfdP03953 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CfdP03953 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.66■□□□□ 0.9
CfdP03953 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CfdP03953 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CfdP03953 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CfdP03953 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.65■□□□□ 0.9
CfdP03953 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CfdP03953 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CfdP03953 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CfdP03953 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CfdP03953 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CfdP03953 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CfdP03953 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CfdP03953 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CfdP03953 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CfdP03953 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CfdP03953 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CfdP03953 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CfdP03953 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CfdP03953 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CfdP03953 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CfdP03953 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.57■□□□□ 0.88
CfdP03953 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CfdP03953 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CfdP03953 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CfdP03953 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CfdP03953 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CfdP03953 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CfdP03953 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CfdP03953 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.51■□□□□ 0.87
CfdP03953 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CfdP03953 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CfdP03953 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CfdP03953 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CfdP03953 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CfdP03953 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CfdP03953 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CfdP03953 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CfdP03953 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CfdP03953 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CfdP03953 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CfdP03953 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CfdP03953 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CfdP03953 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CfdP03953 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CfdP03953 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CfdP03953 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CfdP03953 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CfdP03953 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CfdP03953 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CfdP03953 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CfdP03953 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CfdP03953 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
CfdP03953 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CfdP03953 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CfdP03953 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CfdP03953 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CfdP03953 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CfdP03953 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CfdP03953 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CfdP03953 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CfdP03953 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CfdP03953 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CfdP03953 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CfdP03953 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CfdP03953 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CfdP03953 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CfdP03953 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CfdP03953 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms