Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NgfP01139 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NgfP01139 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.56■■□□□ 1.2
NgfP01139 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NgfP01139 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NgfP01139 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.55■■□□□ 1.2
NgfP01139 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NgfP01139 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.54■■□□□ 1.2
NgfP01139 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NgfP01139 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NgfP01139 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NgfP01139 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.52■■□□□ 1.2
NgfP01139 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NgfP01139 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NgfP01139 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.5■■□□□ 1.19
NgfP01139 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NgfP01139 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
NgfP01139 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NgfP01139 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NgfP01139 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NgfP01139 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.46■■□□□ 1.19
NgfP01139 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NgfP01139 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
NgfP01139 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NgfP01139 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NgfP01139 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NgfP01139 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.41■■□□□ 1.18
NgfP01139 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.41■■□□□ 1.18
NgfP01139 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NgfP01139 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NgfP01139 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NgfP01139 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NgfP01139 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NgfP01139 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
NgfP01139 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
NgfP01139 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
NgfP01139 Nkain2-201ENSMUST00000092602 558 ntBASIC22.39■■□□□ 1.17
NgfP01139 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NgfP01139 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NgfP01139 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NgfP01139 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NgfP01139 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NgfP01139 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.37■■□□□ 1.17
NgfP01139 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NgfP01139 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
NgfP01139 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NgfP01139 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
NgfP01139 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NgfP01139 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NgfP01139 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
NgfP01139 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NgfP01139 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NgfP01139 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NgfP01139 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.31■■□□□ 1.16
NgfP01139 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NgfP01139 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.29■■□□□ 1.16
NgfP01139 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NgfP01139 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NgfP01139 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NgfP01139 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NgfP01139 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
NgfP01139 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NgfP01139 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NgfP01139 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.25■■□□□ 1.15
NgfP01139 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NgfP01139 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NgfP01139 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NgfP01139 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.23■■□□□ 1.15
NgfP01139 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NgfP01139 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NgfP01139 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.22■■□□□ 1.15
NgfP01139 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NgfP01139 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.22■■□□□ 1.15
NgfP01139 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NgfP01139 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NgfP01139 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NgfP01139 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NgfP01139 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NgfP01139 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NgfP01139 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
NgfP01139 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NgfP01139 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NgfP01139 Gm7432-201ENSMUST00000210343 879 ntBASIC22.16■■□□□ 1.14
NgfP01139 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NgfP01139 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NgfP01139 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
NgfP01139 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NgfP01139 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NgfP01139 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NgfP01139 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.1■■□□□ 1.13
NgfP01139 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.09■■□□□ 1.13
NgfP01139 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
NgfP01139 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
NgfP01139 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
NgfP01139 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.09■■□□□ 1.13
NgfP01139 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
NgfP01139 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
NgfP01139 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.08■■□□□ 1.13
NgfP01139 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
NgfP01139 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 262.8 ms