Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cops6O88545 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Cops6O88545 Gm8503-201ENSMUST00000118131 455 ntBASIC31.1■■■□□ 2.57
Cops6O88545 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
Cops6O88545 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cops6O88545 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cops6O88545 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
Cops6O88545 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cops6O88545 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cops6O88545 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cops6O88545 Gm6821-201ENSMUST00000107540 542 ntBASIC31.06■■■□□ 2.56
Cops6O88545 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Cops6O88545 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cops6O88545 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cops6O88545 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cops6O88545 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.03■■■□□ 2.56
Cops6O88545 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cops6O88545 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.02■■■□□ 2.56
Cops6O88545 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cops6O88545 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.01■■■□□ 2.55
Cops6O88545 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Cops6O88545 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.01■■■□□ 2.55
Cops6O88545 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Cops6O88545 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cops6O88545 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cops6O88545 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.99■■■□□ 2.55
Cops6O88545 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cops6O88545 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cops6O88545 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Cops6O88545 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Cops6O88545 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.94■■■□□ 2.54
Cops6O88545 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Cops6O88545 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cops6O88545 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cops6O88545 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.9■■■□□ 2.54
Cops6O88545 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cops6O88545 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cops6O88545 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Cops6O88545 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cops6O88545 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.87■■■□□ 2.53
Cops6O88545 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cops6O88545 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cops6O88545 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cops6O88545 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cops6O88545 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Cops6O88545 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.81■■■□□ 2.52
Cops6O88545 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Cops6O88545 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Cops6O88545 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Cops6O88545 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Cops6O88545 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.79■■■□□ 2.52
Cops6O88545 Nkain2-201ENSMUST00000092602 558 ntBASIC30.78■■■□□ 2.52
Cops6O88545 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.77■■■□□ 2.52
Cops6O88545 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Cops6O88545 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.76■■■□□ 2.51
Cops6O88545 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Cops6O88545 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Cops6O88545 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Cops6O88545 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cops6O88545 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Cops6O88545 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Cops6O88545 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Cops6O88545 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cops6O88545 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cops6O88545 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cops6O88545 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Cops6O88545 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cops6O88545 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cops6O88545 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
Cops6O88545 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
Cops6O88545 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.68■■■□□ 2.5
Cops6O88545 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cops6O88545 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.67■■■□□ 2.5
Cops6O88545 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Cops6O88545 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
Cops6O88545 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.66■■■□□ 2.5
Cops6O88545 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cops6O88545 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.65■■■□□ 2.5
Cops6O88545 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cops6O88545 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Cops6O88545 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cops6O88545 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cops6O88545 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cops6O88545 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cops6O88545 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.58■■■□□ 2.49
Cops6O88545 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.57■■■□□ 2.48
Cops6O88545 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cops6O88545 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cops6O88545 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cops6O88545 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.52■■■□□ 2.48
Cops6O88545 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Cops6O88545 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.5■■■□□ 2.47
Cops6O88545 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Cops6O88545 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Cops6O88545 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cops6O88545 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cops6O88545 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Cops6O88545 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Cops6O88545 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.47■■■□□ 2.47
Cops6O88545 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms