Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Sigmar1O55242 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sigmar1O55242 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sigmar1O55242 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sigmar1O55242 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Sigmar1O55242 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sigmar1O55242 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sigmar1O55242 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sigmar1O55242 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sigmar1O55242 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sigmar1O55242 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sigmar1O55242 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sigmar1O55242 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sigmar1O55242 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sigmar1O55242 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Sigmar1O55242 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sigmar1O55242 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sigmar1O55242 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sigmar1O55242 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sigmar1O55242 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Sigmar1O55242 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sigmar1O55242 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sigmar1O55242 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sigmar1O55242 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sigmar1O55242 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sigmar1O55242 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sigmar1O55242 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sigmar1O55242 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sigmar1O55242 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sigmar1O55242 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sigmar1O55242 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sigmar1O55242 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sigmar1O55242 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sigmar1O55242 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sigmar1O55242 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sigmar1O55242 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Sigmar1O55242 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Sigmar1O55242 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.88■□□□□ 0.29
Sigmar1O55242 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sigmar1O55242 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.88■□□□□ 0.29
Sigmar1O55242 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sigmar1O55242 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Sigmar1O55242 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sigmar1O55242 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sigmar1O55242 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.87■□□□□ 0.29
Sigmar1O55242 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sigmar1O55242 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sigmar1O55242 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sigmar1O55242 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.85■□□□□ 0.29
Sigmar1O55242 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sigmar1O55242 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sigmar1O55242 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sigmar1O55242 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sigmar1O55242 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sigmar1O55242 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Sigmar1O55242 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sigmar1O55242 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sigmar1O55242 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Sigmar1O55242 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sigmar1O55242 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Sigmar1O55242 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sigmar1O55242 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sigmar1O55242 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.8■□□□□ 0.28
Sigmar1O55242 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sigmar1O55242 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sigmar1O55242 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sigmar1O55242 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Sigmar1O55242 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Sigmar1O55242 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sigmar1O55242 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sigmar1O55242 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sigmar1O55242 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sigmar1O55242 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.78■□□□□ 0.28
Sigmar1O55242 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sigmar1O55242 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sigmar1O55242 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Sigmar1O55242 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sigmar1O55242 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sigmar1O55242 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sigmar1O55242 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.77■□□□□ 0.27
Sigmar1O55242 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sigmar1O55242 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sigmar1O55242 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sigmar1O55242 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sigmar1O55242 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sigmar1O55242 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sigmar1O55242 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sigmar1O55242 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sigmar1O55242 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sigmar1O55242 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Sigmar1O55242 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sigmar1O55242 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sigmar1O55242 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.73■□□□□ 0.27
Sigmar1O55242 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sigmar1O55242 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sigmar1O55242 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sigmar1O55242 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sigmar1O55242 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sigmar1O55242 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.71■□□□□ 0.27
Sigmar1O55242 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms