Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pde6dO55057 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.42■□□□□ 0.7
Pde6dO55057 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pde6dO55057 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pde6dO55057 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6dO55057 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pde6dO55057 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Pde6dO55057 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pde6dO55057 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pde6dO55057 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pde6dO55057 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6dO55057 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pde6dO55057 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6dO55057 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pde6dO55057 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pde6dO55057 Rab21-202ENSMUST00000218831 843 ntBASIC19.37■□□□□ 0.69
Pde6dO55057 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6dO55057 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6dO55057 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pde6dO55057 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6dO55057 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pde6dO55057 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pde6dO55057 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6dO55057 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6dO55057 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6dO55057 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6dO55057 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6dO55057 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pde6dO55057 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6dO55057 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6dO55057 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6dO55057 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6dO55057 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6dO55057 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pde6dO55057 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pde6dO55057 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6dO55057 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6dO55057 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pde6dO55057 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Pde6dO55057 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Pde6dO55057 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Pde6dO55057 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pde6dO55057 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pde6dO55057 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.25■□□□□ 0.67
Pde6dO55057 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Pde6dO55057 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6dO55057 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pde6dO55057 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pde6dO55057 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.23■□□□□ 0.67
Pde6dO55057 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6dO55057 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6dO55057 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6dO55057 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.22■□□□□ 0.67
Pde6dO55057 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pde6dO55057 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pde6dO55057 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6dO55057 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pde6dO55057 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pde6dO55057 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.21■□□□□ 0.67
Pde6dO55057 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pde6dO55057 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6dO55057 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6dO55057 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pde6dO55057 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6dO55057 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6dO55057 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pde6dO55057 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6dO55057 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pde6dO55057 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6dO55057 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pde6dO55057 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6dO55057 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pde6dO55057 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6dO55057 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6dO55057 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pde6dO55057 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6dO55057 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.16■□□□□ 0.66
Pde6dO55057 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pde6dO55057 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.16■□□□□ 0.66
Pde6dO55057 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6dO55057 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pde6dO55057 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Pde6dO55057 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6dO55057 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6dO55057 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6dO55057 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pde6dO55057 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.14■□□□□ 0.66
Pde6dO55057 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.14■□□□□ 0.65
Pde6dO55057 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6dO55057 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6dO55057 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6dO55057 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6dO55057 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6dO55057 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6dO55057 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6dO55057 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6dO55057 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6dO55057 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6dO55057 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6dO55057 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms