Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SncaO55042 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SncaO55042 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.27■□□□□ 0.84
SncaO55042 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SncaO55042 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.27■□□□□ 0.84
SncaO55042 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SncaO55042 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SncaO55042 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SncaO55042 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SncaO55042 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.24■□□□□ 0.83
SncaO55042 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SncaO55042 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SncaO55042 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SncaO55042 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.23■□□□□ 0.83
SncaO55042 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.23■□□□□ 0.83
SncaO55042 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SncaO55042 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SncaO55042 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SncaO55042 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SncaO55042 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaO55042 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SncaO55042 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaO55042 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SncaO55042 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SncaO55042 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SncaO55042 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SncaO55042 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SncaO55042 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SncaO55042 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.18■□□□□ 0.82
SncaO55042 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SncaO55042 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SncaO55042 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SncaO55042 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SncaO55042 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SncaO55042 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SncaO55042 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SncaO55042 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.12■□□□□ 0.81
SncaO55042 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SncaO55042 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SncaO55042 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaO55042 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaO55042 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SncaO55042 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.09■□□□□ 0.81
SncaO55042 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SncaO55042 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SncaO55042 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.09■□□□□ 0.81
SncaO55042 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SncaO55042 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SncaO55042 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SncaO55042 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SncaO55042 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.07■□□□□ 0.8
SncaO55042 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SncaO55042 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SncaO55042 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SncaO55042 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SncaO55042 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SncaO55042 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SncaO55042 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SncaO55042 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SncaO55042 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.03■□□□□ 0.8
SncaO55042 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
SncaO55042 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SncaO55042 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SncaO55042 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SncaO55042 Gm24804-201ENSMUST00000174982 85 ntBASIC20.01■□□□□ 0.79
SncaO55042 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SncaO55042 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SncaO55042 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SncaO55042 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SncaO55042 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SncaO55042 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SncaO55042 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20■□□□□ 0.79
SncaO55042 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SncaO55042 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SncaO55042 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SncaO55042 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SncaO55042 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SncaO55042 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.97■□□□□ 0.79
SncaO55042 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SncaO55042 Gm16148-201ENSMUST00000119653 893 ntBASIC19.96■□□□□ 0.79
SncaO55042 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SncaO55042 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.96■□□□□ 0.79
SncaO55042 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.96■□□□□ 0.79
SncaO55042 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SncaO55042 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SncaO55042 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SncaO55042 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SncaO55042 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SncaO55042 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SncaO55042 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SncaO55042 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SncaO55042 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SncaO55042 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SncaO55042 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.94■□□□□ 0.78
SncaO55042 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SncaO55042 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SncaO55042 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SncaO55042 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SncaO55042 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SncaO55042 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms