Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.48■□□□□ 0.71
Efnb3O35393 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Efnb3O35393 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Efnb3O35393 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Efnb3O35393 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Efnb3O35393 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Efnb3O35393 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Efnb3O35393 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Efnb3O35393 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Efnb3O35393 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Efnb3O35393 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Efnb3O35393 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Efnb3O35393 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Efnb3O35393 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Efnb3O35393 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Efnb3O35393 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Efnb3O35393 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.39■□□□□ 0.69
Efnb3O35393 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Efnb3O35393 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.38■□□□□ 0.69
Efnb3O35393 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Efnb3O35393 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Efnb3O35393 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Efnb3O35393 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Efnb3O35393 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb3O35393 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Efnb3O35393 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Efnb3O35393 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Efnb3O35393 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Efnb3O35393 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Efnb3O35393 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Efnb3O35393 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Efnb3O35393 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Efnb3O35393 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.33■□□□□ 0.69
Efnb3O35393 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Efnb3O35393 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Efnb3O35393 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Efnb3O35393 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Efnb3O35393 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Efnb3O35393 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.31■□□□□ 0.68
Efnb3O35393 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb3O35393 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Efnb3O35393 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb3O35393 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.29■□□□□ 0.68
Efnb3O35393 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Efnb3O35393 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Efnb3O35393 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Efnb3O35393 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Efnb3O35393 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Efnb3O35393 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Efnb3O35393 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Efnb3O35393 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Efnb3O35393 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Efnb3O35393 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Efnb3O35393 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb3O35393 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb3O35393 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb3O35393 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb3O35393 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Efnb3O35393 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Efnb3O35393 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.24■□□□□ 0.67
Efnb3O35393 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Efnb3O35393 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Efnb3O35393 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Efnb3O35393 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Efnb3O35393 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb3O35393 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb3O35393 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Efnb3O35393 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Efnb3O35393 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Efnb3O35393 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Efnb3O35393 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.19■□□□□ 0.66
Efnb3O35393 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Efnb3O35393 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Efnb3O35393 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Efnb3O35393 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Efnb3O35393 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Efnb3O35393 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Efnb3O35393 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Efnb3O35393 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Efnb3O35393 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Efnb3O35393 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Efnb3O35393 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Efnb3O35393 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Efnb3O35393 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Efnb3O35393 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Efnb3O35393 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Efnb3O35393 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Efnb3O35393 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Efnb3O35393 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Efnb3O35393 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Efnb3O35393 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Efnb3O35393 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Efnb3O35393 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Efnb3O35393 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Efnb3O35393 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Efnb3O35393 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Efnb3O35393 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.1■□□□□ 0.65
Efnb3O35393 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Efnb3O35393 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Efnb3O35393 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms