Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf11O35235 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfsf11O35235 Gm25262-201ENSMUST00000174934 133 ntBASIC19.2■□□□□ 0.66
Tnfsf11O35235 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Tnfsf11O35235 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tnfsf11O35235 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf11O35235 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf11O35235 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf11O35235 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf11O35235 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tnfsf11O35235 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Tnfsf11O35235 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfsf11O35235 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tnfsf11O35235 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Tnfsf11O35235 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf11O35235 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf11O35235 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfsf11O35235 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf11O35235 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf11O35235 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf11O35235 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfsf11O35235 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf11O35235 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Tnfsf11O35235 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tnfsf11O35235 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfsf11O35235 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf11O35235 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfsf11O35235 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.08■□□□□ 0.65
Tnfsf11O35235 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Tnfsf11O35235 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Tnfsf11O35235 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfsf11O35235 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfsf11O35235 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.06■□□□□ 0.64
Tnfsf11O35235 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Tnfsf11O35235 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfsf11O35235 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfsf11O35235 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.04■□□□□ 0.64
Tnfsf11O35235 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf11O35235 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf11O35235 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf11O35235 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf11O35235 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfsf11O35235 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfsf11O35235 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
Tnfsf11O35235 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfsf11O35235 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.01■□□□□ 0.63
Tnfsf11O35235 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf11O35235 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfsf11O35235 Gm30346-201ENSMUST00000218641 1699 ntBASIC19■□□□□ 0.63
Tnfsf11O35235 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf11O35235 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfsf11O35235 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Tnfsf11O35235 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfsf11O35235 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfsf11O35235 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfsf11O35235 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfsf11O35235 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Tnfsf11O35235 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfsf11O35235 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfsf11O35235 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfsf11O35235 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfsf11O35235 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfsf11O35235 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.96■□□□□ 0.63
Tnfsf11O35235 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tnfsf11O35235 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfsf11O35235 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfsf11O35235 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfsf11O35235 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Tnfsf11O35235 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.95■□□□□ 0.62
Tnfsf11O35235 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfsf11O35235 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tnfsf11O35235 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.92■□□□□ 0.62
Tnfsf11O35235 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.92■□□□□ 0.62
Tnfsf11O35235 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfsf11O35235 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfsf11O35235 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tnfsf11O35235 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.91■□□□□ 0.62
Tnfsf11O35235 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfsf11O35235 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tnfsf11O35235 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfsf11O35235 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tnfsf11O35235 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tnfsf11O35235 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tnfsf11O35235 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfsf11O35235 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tnfsf11O35235 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfsf11O35235 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfsf11O35235 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfsf11O35235 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tnfsf11O35235 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.87■□□□□ 0.61
Tnfsf11O35235 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tnfsf11O35235 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Tnfsf11O35235 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfsf11O35235 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tnfsf11O35235 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf11O35235 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tnfsf11O35235 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf11O35235 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf11O35235 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tnfsf11O35235 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms