Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm5878E9PUB3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm5878E9PUB3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.67■□□□□ 0.58
Gm5878E9PUB3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm5878E9PUB3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.67■□□□□ 0.58
Gm5878E9PUB3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm5878E9PUB3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm5878E9PUB3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm5878E9PUB3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm5878E9PUB3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm5878E9PUB3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Gm5878E9PUB3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm5878E9PUB3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm5878E9PUB3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.65■□□□□ 0.58
Gm5878E9PUB3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gm5878E9PUB3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gm5878E9PUB3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm5878E9PUB3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gm5878E9PUB3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm5878E9PUB3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm5878E9PUB3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
Gm5878E9PUB3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5878E9PUB3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Gm5878E9PUB3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm5878E9PUB3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm5878E9PUB3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
Gm5878E9PUB3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Gm5878E9PUB3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5878E9PUB3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm5878E9PUB3 Gm24804-201ENSMUST00000174982 85 ntBASIC18.57■□□□□ 0.56
Gm5878E9PUB3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm5878E9PUB3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm5878E9PUB3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm5878E9PUB3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm5878E9PUB3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm5878E9PUB3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5878E9PUB3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5878E9PUB3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5878E9PUB3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5878E9PUB3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm5878E9PUB3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5878E9PUB3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5878E9PUB3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5878E9PUB3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5878E9PUB3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm5878E9PUB3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5878E9PUB3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm5878E9PUB3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5878E9PUB3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5878E9PUB3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5878E9PUB3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5878E9PUB3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm5878E9PUB3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm5878E9PUB3 Gm16148-201ENSMUST00000119653 893 ntBASIC18.5■□□□□ 0.55
Gm5878E9PUB3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm5878E9PUB3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm5878E9PUB3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5878E9PUB3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5878E9PUB3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm5878E9PUB3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.47■□□□□ 0.55
Gm5878E9PUB3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm5878E9PUB3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5878E9PUB3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5878E9PUB3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5878E9PUB3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5878E9PUB3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm5878E9PUB3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5878E9PUB3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5878E9PUB3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm5878E9PUB3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5878E9PUB3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5878E9PUB3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm5878E9PUB3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5878E9PUB3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5878E9PUB3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5878E9PUB3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5878E9PUB3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5878E9PUB3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5878E9PUB3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.4■□□□□ 0.54
Gm5878E9PUB3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5878E9PUB3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm5878E9PUB3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5878E9PUB3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5878E9PUB3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5878E9PUB3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Gm5878E9PUB3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5878E9PUB3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5878E9PUB3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.37■□□□□ 0.53
Gm5878E9PUB3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5878E9PUB3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm5878E9PUB3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5878E9PUB3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm5878E9PUB3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5878E9PUB3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5878E9PUB3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5878E9PUB3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm5878E9PUB3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5878E9PUB3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5878E9PUB3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5878E9PUB3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms