Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm12887B1AVM1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm12887B1AVM1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm12887B1AVM1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm12887B1AVM1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm12887B1AVM1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm12887B1AVM1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm12887B1AVM1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm12887B1AVM1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm12887B1AVM1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm12887B1AVM1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm12887B1AVM1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.92■□□□□ 0.78
Gm12887B1AVM1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm12887B1AVM1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm12887B1AVM1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm12887B1AVM1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Gm12887B1AVM1 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.88■□□□□ 0.77
Gm12887B1AVM1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm12887B1AVM1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
Gm12887B1AVM1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12887B1AVM1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12887B1AVM1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12887B1AVM1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm12887B1AVM1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm12887B1AVM1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm12887B1AVM1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm12887B1AVM1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Gm12887B1AVM1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm12887B1AVM1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Gm12887B1AVM1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm12887B1AVM1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm12887B1AVM1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Gm12887B1AVM1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm12887B1AVM1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm12887B1AVM1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm12887B1AVM1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm12887B1AVM1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12887B1AVM1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12887B1AVM1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12887B1AVM1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12887B1AVM1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm12887B1AVM1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.8■□□□□ 0.76
Gm12887B1AVM1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm12887B1AVM1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm12887B1AVM1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm12887B1AVM1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.78■□□□□ 0.76
Gm12887B1AVM1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm12887B1AVM1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm12887B1AVM1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.77■□□□□ 0.76
Gm12887B1AVM1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Gm12887B1AVM1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm12887B1AVM1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm12887B1AVM1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gm12887B1AVM1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gm12887B1AVM1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Gm12887B1AVM1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12887B1AVM1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.74■□□□□ 0.75
Gm12887B1AVM1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gm12887B1AVM1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm12887B1AVM1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm12887B1AVM1 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.72■□□□□ 0.75
Gm12887B1AVM1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12887B1AVM1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12887B1AVM1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm12887B1AVM1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12887B1AVM1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12887B1AVM1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12887B1AVM1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12887B1AVM1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12887B1AVM1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm12887B1AVM1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Gm12887B1AVM1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm12887B1AVM1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm12887B1AVM1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm12887B1AVM1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm12887B1AVM1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm12887B1AVM1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.64■□□□□ 0.74
Gm12887B1AVM1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm12887B1AVM1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm12887B1AVM1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm12887B1AVM1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm12887B1AVM1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm12887B1AVM1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm12887B1AVM1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm12887B1AVM1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm12887B1AVM1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm12887B1AVM1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.6■□□□□ 0.73
Gm12887B1AVM1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm12887B1AVM1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm12887B1AVM1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm12887B1AVM1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Gm12887B1AVM1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm12887B1AVM1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm12887B1AVM1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Gm12887B1AVM1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Gm12887B1AVM1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm12887B1AVM1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm12887B1AVM1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm12887B1AVM1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm12887B1AVM1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms