Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Igkv4-50A0A0B4J1J0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Igkv4-50A0A0B4J1J0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv4-50A0A0B4J1J0 Amer2-203ENSMUST00000225247 2662 ntBASIC20.9■□□□□ 0.94
Igkv4-50A0A0B4J1J0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.89■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.84■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Igkv4-50A0A0B4J1J0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Igkv4-50A0A0B4J1J0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Igkv4-50A0A0B4J1J0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Igkv4-50A0A0B4J1J0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.82■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv4-50A0A0B4J1J0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv4-50A0A0B4J1J0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Igkv4-50A0A0B4J1J0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.76■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Igkv4-50A0A0B4J1J0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.74■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Igkv4-50A0A0B4J1J0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv4-50A0A0B4J1J0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.73■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Igkv4-50A0A0B4J1J0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.72■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.71■□□□□ 0.91
Igkv4-50A0A0B4J1J0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.68■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv4-50A0A0B4J1J0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv4-50A0A0B4J1J0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.64■□□□□ 0.89
Igkv4-50A0A0B4J1J0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
Igkv4-50A0A0B4J1J0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Igkv4-50A0A0B4J1J0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Igkv4-50A0A0B4J1J0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Igkv4-50A0A0B4J1J0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.53■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Igkv4-50A0A0B4J1J0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms