Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ighv1-56A0A0A6YXG2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Ighv1-56A0A0A6YXG2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ighv1-56A0A0A6YXG2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.52■□□□□ 0.24
Ighv1-56A0A0A6YXG2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-56A0A0A6YXG2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ighv1-56A0A0A6YXG2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ighv1-56A0A0A6YXG2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC16.51■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.48■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-56A0A0A6YXG2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv1-56A0A0A6YXG2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.36■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv1-56A0A0A6YXG2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.35■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv1-56A0A0A6YXG2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.33■□□□□ 0.21
Ighv1-56A0A0A6YXG2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.33■□□□□ 0.2
Ighv1-56A0A0A6YXG2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-56A0A0A6YXG2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Gm24804-201ENSMUST00000174982 85 ntBASIC16.28■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-56A0A0A6YXG2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ighv1-56A0A0A6YXG2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.25■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-56A0A0A6YXG2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms