Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav14d-1A0A075B6B1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav14d-1A0A075B6B1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav14d-1A0A075B6B1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav14d-1A0A075B6B1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav14d-1A0A075B6B1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav14d-1A0A075B6B1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav14d-1A0A075B6B1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav14d-1A0A075B6B1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav14d-1A0A075B6B1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav14d-1A0A075B6B1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav14d-1A0A075B6B1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav14d-1A0A075B6B1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav14d-1A0A075B6B1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav14d-1A0A075B6B1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav14d-1A0A075B6B1 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.34■□□□□ 0.53
Trav14d-1A0A075B6B1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav14d-1A0A075B6B1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
Trav14d-1A0A075B6B1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav14d-1A0A075B6B1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav14d-1A0A075B6B1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav14d-1A0A075B6B1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav14d-1A0A075B6B1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav14d-1A0A075B6B1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Trav14d-1A0A075B6B1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trav14d-1A0A075B6B1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav14d-1A0A075B6B1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav14d-1A0A075B6B1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14d-1A0A075B6B1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Trav14d-1A0A075B6B1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14d-1A0A075B6B1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.29■□□□□ 0.52
Trav14d-1A0A075B6B1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14d-1A0A075B6B1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14d-1A0A075B6B1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14d-1A0A075B6B1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14d-1A0A075B6B1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav14d-1A0A075B6B1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav14d-1A0A075B6B1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav14d-1A0A075B6B1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14d-1A0A075B6B1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav14d-1A0A075B6B1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trav14d-1A0A075B6B1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trav14d-1A0A075B6B1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14d-1A0A075B6B1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14d-1A0A075B6B1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav14d-1A0A075B6B1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trav14d-1A0A075B6B1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav14d-1A0A075B6B1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav14d-1A0A075B6B1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav14d-1A0A075B6B1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Trav14d-1A0A075B6B1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav14d-1A0A075B6B1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.19■□□□□ 0.5
Trav14d-1A0A075B6B1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav14d-1A0A075B6B1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14d-1A0A075B6B1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14d-1A0A075B6B1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav14d-1A0A075B6B1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav14d-1A0A075B6B1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav14d-1A0A075B6B1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.15■□□□□ 0.5
Trav14d-1A0A075B6B1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav14d-1A0A075B6B1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav14d-1A0A075B6B1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trav14d-1A0A075B6B1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav14d-1A0A075B6B1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav14d-1A0A075B6B1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav14d-1A0A075B6B1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav14d-1A0A075B6B1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav14d-1A0A075B6B1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14d-1A0A075B6B1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav14d-1A0A075B6B1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav14d-1A0A075B6B1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav14d-1A0A075B6B1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav14d-1A0A075B6B1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Trav14d-1A0A075B6B1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav14d-1A0A075B6B1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav14d-1A0A075B6B1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav14d-1A0A075B6B1 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.06■□□□□ 0.48
Trav14d-1A0A075B6B1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14d-1A0A075B6B1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav14d-1A0A075B6B1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14d-1A0A075B6B1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14d-1A0A075B6B1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14d-1A0A075B6B1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav14d-1A0A075B6B1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14d-1A0A075B6B1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Trav14d-1A0A075B6B1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav14d-1A0A075B6B1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14d-1A0A075B6B1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14d-1A0A075B6B1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav14d-1A0A075B6B1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav14d-1A0A075B6B1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Trav14d-1A0A075B6B1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav14d-1A0A075B6B1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms