Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trav14n-3A0A075B645 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav14n-3A0A075B645 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav14n-3A0A075B645 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav14n-3A0A075B645 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav14n-3A0A075B645 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav14n-3A0A075B645 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav14n-3A0A075B645 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Trav14n-3A0A075B645 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav14n-3A0A075B645 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav14n-3A0A075B645 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav14n-3A0A075B645 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav14n-3A0A075B645 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav14n-3A0A075B645 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav14n-3A0A075B645 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Trav14n-3A0A075B645 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14n-3A0A075B645 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav14n-3A0A075B645 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav14n-3A0A075B645 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav14n-3A0A075B645 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav14n-3A0A075B645 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.52■□□□□ 0.56
Trav14n-3A0A075B645 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav14n-3A0A075B645 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav14n-3A0A075B645 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trav14n-3A0A075B645 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav14n-3A0A075B645 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav14n-3A0A075B645 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.5■□□□□ 0.55
Trav14n-3A0A075B645 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.49■□□□□ 0.55
Trav14n-3A0A075B645 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav14n-3A0A075B645 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.49■□□□□ 0.55
Trav14n-3A0A075B645 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav14n-3A0A075B645 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav14n-3A0A075B645 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.48■□□□□ 0.55
Trav14n-3A0A075B645 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav14n-3A0A075B645 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav14n-3A0A075B645 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Trav14n-3A0A075B645 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav14n-3A0A075B645 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav14n-3A0A075B645 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav14n-3A0A075B645 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav14n-3A0A075B645 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav14n-3A0A075B645 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.45■□□□□ 0.54
Trav14n-3A0A075B645 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav14n-3A0A075B645 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav14n-3A0A075B645 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.43■□□□□ 0.54
Trav14n-3A0A075B645 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14n-3A0A075B645 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14n-3A0A075B645 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav14n-3A0A075B645 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav14n-3A0A075B645 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav14n-3A0A075B645 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav14n-3A0A075B645 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav14n-3A0A075B645 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav14n-3A0A075B645 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav14n-3A0A075B645 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav14n-3A0A075B645 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav14n-3A0A075B645 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav14n-3A0A075B645 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav14n-3A0A075B645 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav14n-3A0A075B645 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav14n-3A0A075B645 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav14n-3A0A075B645 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav14n-3A0A075B645 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav14n-3A0A075B645 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav14n-3A0A075B645 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav14n-3A0A075B645 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Trav14n-3A0A075B645 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav14n-3A0A075B645 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav14n-3A0A075B645 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav14n-3A0A075B645 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav14n-3A0A075B645 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav14n-3A0A075B645 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav14n-3A0A075B645 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav14n-3A0A075B645 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14n-3A0A075B645 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14n-3A0A075B645 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav14n-3A0A075B645 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14n-3A0A075B645 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav14n-3A0A075B645 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav14n-3A0A075B645 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav14n-3A0A075B645 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trav14n-3A0A075B645 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav14n-3A0A075B645 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav14n-3A0A075B645 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav14n-3A0A075B645 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav14n-3A0A075B645 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav14n-3A0A075B645 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms