Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trav4d-3A0A075B625 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav4d-3A0A075B625 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4d-3A0A075B625 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav4d-3A0A075B625 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trav4d-3A0A075B625 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4d-3A0A075B625 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Trav4d-3A0A075B625 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4d-3A0A075B625 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4d-3A0A075B625 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav4d-3A0A075B625 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4d-3A0A075B625 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav4d-3A0A075B625 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.72■□□□□ 0.27
Trav4d-3A0A075B625 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav4d-3A0A075B625 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav4d-3A0A075B625 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Trav4d-3A0A075B625 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav4d-3A0A075B625 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4d-3A0A075B625 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4d-3A0A075B625 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trav4d-3A0A075B625 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4d-3A0A075B625 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4d-3A0A075B625 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav4d-3A0A075B625 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4d-3A0A075B625 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trav4d-3A0A075B625 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4d-3A0A075B625 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4d-3A0A075B625 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav4d-3A0A075B625 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4d-3A0A075B625 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4d-3A0A075B625 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav4d-3A0A075B625 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4d-3A0A075B625 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav4d-3A0A075B625 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4d-3A0A075B625 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Trav4d-3A0A075B625 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav4d-3A0A075B625 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4d-3A0A075B625 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4d-3A0A075B625 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4d-3A0A075B625 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4d-3A0A075B625 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4d-3A0A075B625 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav4d-3A0A075B625 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4d-3A0A075B625 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4d-3A0A075B625 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4d-3A0A075B625 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4d-3A0A075B625 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4d-3A0A075B625 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4d-3A0A075B625 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4d-3A0A075B625 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4d-3A0A075B625 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4d-3A0A075B625 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4d-3A0A075B625 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Trav4d-3A0A075B625 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.58■□□□□ 0.24
Trav4d-3A0A075B625 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav4d-3A0A075B625 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav4d-3A0A075B625 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.56■□□□□ 0.24
Trav4d-3A0A075B625 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4d-3A0A075B625 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav4d-3A0A075B625 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4d-3A0A075B625 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4d-3A0A075B625 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav4d-3A0A075B625 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4d-3A0A075B625 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav4d-3A0A075B625 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.52■□□□□ 0.24
Trav4d-3A0A075B625 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4d-3A0A075B625 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4d-3A0A075B625 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4d-3A0A075B625 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4d-3A0A075B625 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav4d-3A0A075B625 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4d-3A0A075B625 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Trav4d-3A0A075B625 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4d-3A0A075B625 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4d-3A0A075B625 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4d-3A0A075B625 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4d-3A0A075B625 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4d-3A0A075B625 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4d-3A0A075B625 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav4d-3A0A075B625 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trav4d-3A0A075B625 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Trav4d-3A0A075B625 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4d-3A0A075B625 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4d-3A0A075B625 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4d-3A0A075B625 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4d-3A0A075B625 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms