Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hmgn5Q9JL35 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn5Q9JL35 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Hmgn5Q9JL35 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hmgn5Q9JL35 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn5Q9JL35 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgn5Q9JL35 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn5Q9JL35 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn5Q9JL35 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.72■□□□□ 0.91
Hmgn5Q9JL35 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn5Q9JL35 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn5Q9JL35 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms