Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx41Q91VN6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Gm20760-201ENSMUST00000179197 648 ntBASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Gm20049-201ENSMUST00000219950 730 ntBASIC21.11■□□□□ 0.97
Ddx41Q91VN6 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx41Q91VN6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ddx41Q91VN6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Ddx41Q91VN6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.09■□□□□ 0.97
Ddx41Q91VN6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx41Q91VN6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ddx41Q91VN6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx41Q91VN6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ddx41Q91VN6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Gm26524-201ENSMUST00000192339 390 ntBASIC21.08■□□□□ 0.97
Ddx41Q91VN6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx41Q91VN6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx41Q91VN6 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.08■□□□□ 0.96
Ddx41Q91VN6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx41Q91VN6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx41Q91VN6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx41Q91VN6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx41Q91VN6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx41Q91VN6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms