Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.42■□□□□ 0.38
Brf2Q3UAW9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Brf2Q3UAW9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Brf2Q3UAW9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.41■□□□□ 0.38
Brf2Q3UAW9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.41■□□□□ 0.38
Brf2Q3UAW9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.41■□□□□ 0.38
Brf2Q3UAW9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.41■□□□□ 0.38
Brf2Q3UAW9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brf2Q3UAW9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brf2Q3UAW9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Brf2Q3UAW9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Brf2Q3UAW9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Brf2Q3UAW9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.39■□□□□ 0.37
Brf2Q3UAW9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Brf2Q3UAW9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brf2Q3UAW9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brf2Q3UAW9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brf2Q3UAW9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brf2Q3UAW9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms