Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd3P97770 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Thumpd3P97770 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thumpd3P97770 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Thumpd3P97770 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.77■□□□□ 0.59
Thumpd3P97770 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Thumpd3P97770 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.76■□□□□ 0.59
Thumpd3P97770 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Thumpd3P97770 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.76■□□□□ 0.59
Thumpd3P97770 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Thumpd3P97770 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.76■□□□□ 0.59
Thumpd3P97770 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Thumpd3P97770 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Gm29257-201ENSMUST00000186115 639 ntBASIC18.75■□□□□ 0.59
Thumpd3P97770 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Thumpd3P97770 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd3P97770 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd3P97770 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd3P97770 Gm26571-201ENSMUST00000181399 666 ntBASIC18.74■□□□□ 0.59
Thumpd3P97770 Gm7291-201ENSMUST00000199147 382 ntBASIC18.74■□□□□ 0.59
Thumpd3P97770 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.74■□□□□ 0.59
Thumpd3P97770 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Thumpd3P97770 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Thumpd3P97770 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Thumpd3P97770 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Thumpd3P97770 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.73■□□□□ 0.59
Thumpd3P97770 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Thumpd3P97770 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.72■□□□□ 0.59
Thumpd3P97770 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Thumpd3P97770 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Thumpd3P97770 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd3P97770 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Thumpd3P97770 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Thumpd3P97770 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.71■□□□□ 0.59
Thumpd3P97770 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Thumpd3P97770 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd3P97770 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Thumpd3P97770 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
Thumpd3P97770 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Thumpd3P97770 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Thumpd3P97770 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd3P97770 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Thumpd3P97770 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Thumpd3P97770 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Thumpd3P97770 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms