Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm3P21107 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Tpm3P21107 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tpm3P21107 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tpm3P21107 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.7■□□□□ 0.9
Tpm3P21107 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm3P21107 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tpm3P21107 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm3P21107 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.69■□□□□ 0.9
Tpm3P21107 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.69■□□□□ 0.9
Tpm3P21107 Gm7417-201ENSMUST00000192950 473 ntBASIC20.69■□□□□ 0.9
Tpm3P21107 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tpm3P21107 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm3P21107 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tpm3P21107 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tpm3P21107 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Tpm3P21107 Serp2-204ENSMUST00000228055 705 ntBASIC20.68■□□□□ 0.9
Tpm3P21107 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm3P21107 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm3P21107 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm3P21107 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm3P21107 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm3P21107 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.68■□□□□ 0.9
Tpm3P21107 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Tpm3P21107 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm3P21107 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tpm3P21107 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Gm8969-201ENSMUST00000199694 526 ntBASIC20.66■□□□□ 0.9
Tpm3P21107 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.66■□□□□ 0.9
Tpm3P21107 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tpm3P21107 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tpm3P21107 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm3P21107 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Tpm3P21107 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Tpm3P21107 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
Tpm3P21107 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Tpm3P21107 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tpm3P21107 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm3P21107 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm3P21107 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tpm3P21107 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm3P21107 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm3P21107 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm3P21107 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm3P21107 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm3P21107 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tpm3P21107 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm3P21107 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tpm3P21107 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tpm3P21107 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 186.8 ms