Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shroom1Q5SX79 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Gm10812-201ENSMUST00000099864 546 ntBASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shroom1Q5SX79 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shroom1Q5SX79 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shroom1Q5SX79 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shroom1Q5SX79 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Gm12896-201ENSMUST00000118430 226 ntBASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Gm2559-201ENSMUST00000201323 363 ntBASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shroom1Q5SX79 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Gm27275-201ENSMUST00000184318 272 ntBASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shroom1Q5SX79 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom1Q5SX79 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shroom1Q5SX79 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom1Q5SX79 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shroom1Q5SX79 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Shroom1Q5SX79 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms