Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ddx41Q91VN6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx41Q91VN6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Ddx41Q91VN6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx41Q91VN6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx41Q91VN6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx41Q91VN6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx41Q91VN6 Grk6-206ENSMUST00000224995 2971 ntBASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Gm6211-202ENSMUST00000167849 925 ntBASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx41Q91VN6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Gm10653-202ENSMUST00000139570 835 ntBASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.23■□□□□ 0.99
Ddx41Q91VN6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ddx41Q91VN6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Gm12527-201ENSMUST00000117967 564 ntBASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Gm5408-201ENSMUST00000197998 747 ntBASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.21■□□□□ 0.99
Ddx41Q91VN6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx41Q91VN6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ddx41Q91VN6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ddx41Q91VN6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx41Q91VN6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms