Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim60Q8VI40 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.23■□□□□ 0.67
Trim60Q8VI40 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim60Q8VI40 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim60Q8VI40 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.21■□□□□ 0.67
Trim60Q8VI40 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.21■□□□□ 0.67
Trim60Q8VI40 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim60Q8VI40 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.2■□□□□ 0.66
Trim60Q8VI40 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.2■□□□□ 0.66
Trim60Q8VI40 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.2■□□□□ 0.66
Trim60Q8VI40 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim60Q8VI40 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.19■□□□□ 0.66
Trim60Q8VI40 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Trim60Q8VI40 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms