Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 BC021767-201ENSMUST00000126387 1716 ntBASIC17.5■□□□□ 0.39
Mmp25Q3U435 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp25Q3U435 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp25Q3U435 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.48■□□□□ 0.39
Mmp25Q3U435 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp25Q3U435 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Gm29257-201ENSMUST00000186115 639 ntBASIC17.47■□□□□ 0.39
Mmp25Q3U435 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.47■□□□□ 0.39
Mmp25Q3U435 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Mmp25Q3U435 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp25Q3U435 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.47■□□□□ 0.39
Mmp25Q3U435 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.46■□□□□ 0.39
Mmp25Q3U435 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp25Q3U435 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp25Q3U435 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.45■□□□□ 0.38
Mmp25Q3U435 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp25Q3U435 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Gm5408-201ENSMUST00000197998 747 ntBASIC17.44■□□□□ 0.38
Mmp25Q3U435 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp25Q3U435 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms