Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.67■□□□□ 0.9
Usp6nlQ80XC3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.67■□□□□ 0.9
Usp6nlQ80XC3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp6nlQ80XC3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp6nlQ80XC3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp6nlQ80XC3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp6nlQ80XC3 Mir1199-201ENSMUST00000117015 119 ntBASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Gm13158-201ENSMUST00000122007 736 ntBASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp6nlQ80XC3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp6nlQ80XC3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Usp6nlQ80XC3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp6nlQ80XC3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp6nlQ80XC3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp6nlQ80XC3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp6nlQ80XC3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp6nlQ80XC3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp6nlQ80XC3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp6nlQ80XC3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp6nlQ80XC3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp6nlQ80XC3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Usp6nlQ80XC3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Usp6nlQ80XC3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Usp6nlQ80XC3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Gm15565-201ENSMUST00000118890 427 ntBASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Gm37055-201ENSMUST00000191866 133 ntBASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Usp6nlQ80XC3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms