Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm11236J3QMS7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm11236J3QMS7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Mir7071-201ENSMUST00000184847 69 ntBASIC19.62■□□□□ 0.73
Gm11236J3QMS7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm11236J3QMS7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Gm11236J3QMS7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Gm22325-201ENSMUST00000158904 308 ntBASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
Gm11236J3QMS7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.59■□□□□ 0.73
Gm11236J3QMS7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm11236J3QMS7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm11236J3QMS7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gm11236J3QMS7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Mir1199-201ENSMUST00000117015 119 ntBASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Gm715-201ENSMUST00000117865 831 ntBASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm11236J3QMS7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms