Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim60Q8VI40 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Gm7860-201ENSMUST00000121190 879 ntBASIC19.38■□□□□ 0.69
Trim60Q8VI40 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Gm27801-201ENSMUST00000184174 223 ntBASIC19.38■□□□□ 0.69
Trim60Q8VI40 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.38■□□□□ 0.69
Trim60Q8VI40 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Trim60Q8VI40 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.37■□□□□ 0.69
Trim60Q8VI40 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim60Q8VI40 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.37■□□□□ 0.69
Trim60Q8VI40 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim60Q8VI40 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Mir7075-201ENSMUST00000184187 82 ntBASIC19.36■□□□□ 0.69
Trim60Q8VI40 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim60Q8VI40 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim60Q8VI40 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim60Q8VI40 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim60Q8VI40 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim60Q8VI40 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim60Q8VI40 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim60Q8VI40 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Trim60Q8VI40 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.33■□□□□ 0.68
Trim60Q8VI40 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim60Q8VI40 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim60Q8VI40 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim60Q8VI40 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim60Q8VI40 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.32■□□□□ 0.68
Trim60Q8VI40 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms