Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.79■□□□□ 0.44
SynbQ8BI41 Rarb-207ENSMUST00000225921 2756 ntBASIC17.79■□□□□ 0.44
SynbQ8BI41 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SynbQ8BI41 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Gm13534-201ENSMUST00000121169 513 ntBASIC17.78■□□□□ 0.44
SynbQ8BI41 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.78■□□□□ 0.44
SynbQ8BI41 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.78■□□□□ 0.44
SynbQ8BI41 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SynbQ8BI41 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.77■□□□□ 0.44
SynbQ8BI41 Gm6420-201ENSMUST00000193885 723 ntBASIC17.77■□□□□ 0.44
SynbQ8BI41 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SynbQ8BI41 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SynbQ8BI41 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SynbQ8BI41 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SynbQ8BI41 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.77■□□□□ 0.43
SynbQ8BI41 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SynbQ8BI41 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SynbQ8BI41 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.76■□□□□ 0.43
SynbQ8BI41 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SynbQ8BI41 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SynbQ8BI41 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SynbQ8BI41 Gm6211-202ENSMUST00000167849 925 ntBASIC17.76■□□□□ 0.43
SynbQ8BI41 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SynbQ8BI41 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SynbQ8BI41 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynbQ8BI41 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.76■□□□□ 0.43
SynbQ8BI41 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynbQ8BI41 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SynbQ8BI41 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.75■□□□□ 0.43
SynbQ8BI41 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SynbQ8BI41 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.75■□□□□ 0.43
SynbQ8BI41 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SynbQ8BI41 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SynbQ8BI41 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Gm20049-201ENSMUST00000219950 730 ntBASIC17.74■□□□□ 0.43
SynbQ8BI41 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SynbQ8BI41 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SynbQ8BI41 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SynbQ8BI41 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Gm10252-201ENSMUST00000209541 832 ntBASIC17.73■□□□□ 0.43
SynbQ8BI41 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SynbQ8BI41 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SynbQ8BI41 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms