Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VcanQ62059 Gm7284-201ENSMUST00000131667 944 ntBASIC17.81■□□□□ 0.44
VcanQ62059 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.81■□□□□ 0.44
VcanQ62059 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VcanQ62059 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VcanQ62059 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VcanQ62059 Gm14859-201ENSMUST00000117752 357 ntBASIC17.8■□□□□ 0.44
VcanQ62059 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VcanQ62059 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
VcanQ62059 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VcanQ62059 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VcanQ62059 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VcanQ62059 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VcanQ62059 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VcanQ62059 Gm13158-201ENSMUST00000122007 736 ntBASIC17.8■□□□□ 0.44
VcanQ62059 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VcanQ62059 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VcanQ62059 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VcanQ62059 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.79■□□□□ 0.44
VcanQ62059 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VcanQ62059 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.79■□□□□ 0.44
VcanQ62059 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VcanQ62059 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VcanQ62059 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VcanQ62059 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VcanQ62059 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VcanQ62059 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.79■□□□□ 0.44
VcanQ62059 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.79■□□□□ 0.44
VcanQ62059 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.78■□□□□ 0.44
VcanQ62059 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VcanQ62059 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.78■□□□□ 0.44
VcanQ62059 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VcanQ62059 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VcanQ62059 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VcanQ62059 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VcanQ62059 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VcanQ62059 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
VcanQ62059 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VcanQ62059 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VcanQ62059 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
VcanQ62059 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.77■□□□□ 0.43
VcanQ62059 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VcanQ62059 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
VcanQ62059 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.76■□□□□ 0.43
VcanQ62059 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
VcanQ62059 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VcanQ62059 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VcanQ62059 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.75■□□□□ 0.43
VcanQ62059 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VcanQ62059 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VcanQ62059 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VcanQ62059 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VcanQ62059 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VcanQ62059 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VcanQ62059 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VcanQ62059 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.74■□□□□ 0.43
VcanQ62059 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
VcanQ62059 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
VcanQ62059 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
VcanQ62059 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VcanQ62059 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VcanQ62059 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VcanQ62059 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.73■□□□□ 0.43
VcanQ62059 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.73■□□□□ 0.43
VcanQ62059 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VcanQ62059 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VcanQ62059 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms