Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col10a1Q05306 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Col10a1Q05306 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.24■□□□□ 0.35
Col10a1Q05306 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Col10a1Q05306 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col10a1Q05306 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Col10a1Q05306 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Col10a1Q05306 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col10a1Q05306 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.22■□□□□ 0.35
Col10a1Q05306 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.22■□□□□ 0.35
Col10a1Q05306 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.22■□□□□ 0.35
Col10a1Q05306 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col10a1Q05306 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col10a1Q05306 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.21■□□□□ 0.35
Col10a1Q05306 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Gm27405-201ENSMUST00000184201 112 ntBASIC17.21■□□□□ 0.35
Col10a1Q05306 Gm6420-201ENSMUST00000193885 723 ntBASIC17.21■□□□□ 0.35
Col10a1Q05306 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.21■□□□□ 0.35
Col10a1Q05306 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.21■□□□□ 0.35
Col10a1Q05306 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Col10a1Q05306 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col10a1Q05306 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col10a1Q05306 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col10a1Q05306 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col10a1Q05306 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.2■□□□□ 0.34
Col10a1Q05306 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Nespas-201ENSMUST00000143738 1083 ntBASIC17.2■□□□□ 0.34
Col10a1Q05306 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.2■□□□□ 0.34
Col10a1Q05306 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col10a1Q05306 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col10a1Q05306 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.2■□□□□ 0.34
Col10a1Q05306 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col10a1Q05306 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col10a1Q05306 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col10a1Q05306 Gm7291-201ENSMUST00000199147 382 ntBASIC17.19■□□□□ 0.34
Col10a1Q05306 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col10a1Q05306 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Col10a1Q05306 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.19■□□□□ 0.34
Col10a1Q05306 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col10a1Q05306 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms