Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.03■□□□□ 0.64
Thumpd3P97770 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.03■□□□□ 0.64
Thumpd3P97770 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Thumpd3P97770 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.02■□□□□ 0.64
Thumpd3P97770 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.02■□□□□ 0.64
Thumpd3P97770 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Thumpd3P97770 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Thumpd3P97770 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.02■□□□□ 0.64
Thumpd3P97770 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Thumpd3P97770 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thumpd3P97770 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Thumpd3P97770 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thumpd3P97770 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Thumpd3P97770 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thumpd3P97770 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thumpd3P97770 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Thumpd3P97770 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Thumpd3P97770 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.01■□□□□ 0.63
Thumpd3P97770 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Gm5874-201ENSMUST00000096101 508 ntBASIC19.01■□□□□ 0.63
Thumpd3P97770 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Thumpd3P97770 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Thumpd3P97770 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Thumpd3P97770 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Thumpd3P97770 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19■□□□□ 0.63
Thumpd3P97770 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Thumpd3P97770 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19■□□□□ 0.63
Thumpd3P97770 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Gm32699-201ENSMUST00000221728 1988 ntBASIC19■□□□□ 0.63
Thumpd3P97770 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Thumpd3P97770 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.99■□□□□ 0.63
Thumpd3P97770 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Thumpd3P97770 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.98■□□□□ 0.63
Thumpd3P97770 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Thumpd3P97770 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Thumpd3P97770 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Thumpd3P97770 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd3P97770 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.97■□□□□ 0.63
Thumpd3P97770 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Thumpd3P97770 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Thumpd3P97770 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.97■□□□□ 0.63
Thumpd3P97770 Gm43060-201ENSMUST00000200621 289 ntBASIC18.97■□□□□ 0.63
Thumpd3P97770 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd3P97770 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms