Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC24.47■■□□□ 1.51
Uspl1Q3ULM6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Uspl1Q3ULM6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Uspl1Q3ULM6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Uspl1Q3ULM6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Uspl1Q3ULM6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Uspl1Q3ULM6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Gm37179-201ENSMUST00000194862 823 ntBASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC24.42■■□□□ 1.5
Uspl1Q3ULM6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Uspl1Q3ULM6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC24.4■■□□□ 1.5
Uspl1Q3ULM6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Uspl1Q3ULM6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Uspl1Q3ULM6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Uspl1Q3ULM6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Uspl1Q3ULM6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Uspl1Q3ULM6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 AC164629.5-201ENSMUST00000220387 632 ntBASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Uspl1Q3ULM6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Uspl1Q3ULM6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms