Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp25Q3U435 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp25Q3U435 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.7■□□□□ 0.42
Mmp25Q3U435 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp25Q3U435 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp25Q3U435 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.7■□□□□ 0.42
Mmp25Q3U435 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp25Q3U435 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp25Q3U435 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.69■□□□□ 0.42
Mmp25Q3U435 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mmp25Q3U435 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.68■□□□□ 0.42
Mmp25Q3U435 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.68■□□□□ 0.42
Mmp25Q3U435 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp25Q3U435 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Gm12933-201ENSMUST00000120203 872 ntBASIC17.67■□□□□ 0.42
Mmp25Q3U435 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp25Q3U435 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.66■□□□□ 0.42
Mmp25Q3U435 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.66■□□□□ 0.42
Mmp25Q3U435 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp25Q3U435 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Gm7290-201ENSMUST00000104990 617 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Gm12918-201ENSMUST00000120234 636 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Gm15710-201ENSMUST00000121821 636 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Gm5075-201ENSMUST00000196916 622 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp25Q3U435 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.65■□□□□ 0.42
Mmp25Q3U435 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mmp25Q3U435 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp25Q3U435 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
Mmp25Q3U435 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp25Q3U435 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.64■□□□□ 0.41
Mmp25Q3U435 Gm6365-201ENSMUST00000054711 744 ntBASIC17.64■□□□□ 0.41
Mmp25Q3U435 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp25Q3U435 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp25Q3U435 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp25Q3U435 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp25Q3U435 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.63■□□□□ 0.41
Mmp25Q3U435 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms