Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim43aQ3TL54 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim43aQ3TL54 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim43aQ3TL54 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim43aQ3TL54 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.88■□□□□ 0.77
Trim43aQ3TL54 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim43aQ3TL54 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim43aQ3TL54 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim43aQ3TL54 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.86■□□□□ 0.77
Trim43aQ3TL54 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim43aQ3TL54 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms