Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn6Q03958 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.84■□□□□ 0.61
Pfdn6Q03958 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.84■□□□□ 0.61
Pfdn6Q03958 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn6Q03958 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pfdn6Q03958 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pfdn6Q03958 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn6Q03958 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn6Q03958 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn6Q03958 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn6Q03958 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Gm7860-201ENSMUST00000121190 879 ntBASIC18.82■□□□□ 0.6
Pfdn6Q03958 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn6Q03958 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.81■□□□□ 0.6
Pfdn6Q03958 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn6Q03958 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn6Q03958 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.79■□□□□ 0.6
Pfdn6Q03958 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pfdn6Q03958 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms