Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd3P97770 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd3P97770 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Thumpd3P97770 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.09■□□□□ 0.65
Thumpd3P97770 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Thumpd3P97770 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Thumpd3P97770 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Thumpd3P97770 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.09■□□□□ 0.65
Thumpd3P97770 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Thumpd3P97770 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.09■□□□□ 0.65
Thumpd3P97770 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Thumpd3P97770 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Thumpd3P97770 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Thumpd3P97770 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Thumpd3P97770 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Thumpd3P97770 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Thumpd3P97770 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.08■□□□□ 0.64
Thumpd3P97770 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.08■□□□□ 0.64
Thumpd3P97770 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.08■□□□□ 0.64
Thumpd3P97770 Spcs1-204ENSMUST00000226782 949 ntBASIC19.08■□□□□ 0.64
Thumpd3P97770 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Thumpd3P97770 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.08■□□□□ 0.64
Thumpd3P97770 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Thumpd3P97770 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Thumpd3P97770 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Thumpd3P97770 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.07■□□□□ 0.64
Thumpd3P97770 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.07■□□□□ 0.64
Thumpd3P97770 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Thumpd3P97770 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Thumpd3P97770 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.06■□□□□ 0.64
Thumpd3P97770 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.06■□□□□ 0.64
Thumpd3P97770 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Thumpd3P97770 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.06■□□□□ 0.64
Thumpd3P97770 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Thumpd3P97770 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.05■□□□□ 0.64
Thumpd3P97770 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.05■□□□□ 0.64
Thumpd3P97770 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 BC021767-201ENSMUST00000126387 1716 ntBASIC19.05■□□□□ 0.64
Thumpd3P97770 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Thumpd3P97770 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Thumpd3P97770 Gm26833-201ENSMUST00000180899 440 ntBASIC19.04■□□□□ 0.64
Thumpd3P97770 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Thumpd3P97770 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd3P97770 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd3P97770 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Thumpd3P97770 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd3P97770 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Thumpd3P97770 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Thumpd3P97770 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms