Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.19■□□□□ 0.82
Nop53Q8BK35 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nop53Q8BK35 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Gm43137-201ENSMUST00000198052 594 ntBASIC20.18■□□□□ 0.82
Nop53Q8BK35 Gm6139-201ENSMUST00000079261 882 ntBASIC20.18■□□□□ 0.82
Nop53Q8BK35 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.16■□□□□ 0.82
Nop53Q8BK35 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nop53Q8BK35 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nop53Q8BK35 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Nop53Q8BK35 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Spcs1-204ENSMUST00000226782 949 ntBASIC20.14■□□□□ 0.81
Nop53Q8BK35 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.13■□□□□ 0.81
Nop53Q8BK35 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 BC021767-201ENSMUST00000126387 1716 ntBASIC20.13■□□□□ 0.81
Nop53Q8BK35 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms