Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nop53Q8BK35 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.19■□□□□ 0.82
Nop53Q8BK35 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nop53Q8BK35 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.19■□□□□ 0.82
Nop53Q8BK35 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Gm43137-201ENSMUST00000198052 594 ntBASIC20.18■□□□□ 0.82
Nop53Q8BK35 Gm6139-201ENSMUST00000079261 882 ntBASIC20.18■□□□□ 0.82
Nop53Q8BK35 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Nop53Q8BK35 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Nop53Q8BK35 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.16■□□□□ 0.82
Nop53Q8BK35 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nop53Q8BK35 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nop53Q8BK35 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nop53Q8BK35 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nop53Q8BK35 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Nop53Q8BK35 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Spcs1-204ENSMUST00000226782 949 ntBASIC20.14■□□□□ 0.81
Nop53Q8BK35 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nop53Q8BK35 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.13■□□□□ 0.81
Nop53Q8BK35 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 BC021767-201ENSMUST00000126387 1716 ntBASIC20.13■□□□□ 0.81
Nop53Q8BK35 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nop53Q8BK35 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Nop53Q8BK35 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nop53Q8BK35 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms