Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Brf2Q3UAW9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Brf2Q3UAW9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brf2Q3UAW9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brf2Q3UAW9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Brf2Q3UAW9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.77■□□□□ 0.43
Brf2Q3UAW9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Brf2Q3UAW9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Brf2Q3UAW9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Gm43060-201ENSMUST00000200621 289 ntBASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Brf2Q3UAW9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Brf2Q3UAW9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.75■□□□□ 0.43
Brf2Q3UAW9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Brf2Q3UAW9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.73■□□□□ 0.43
Brf2Q3UAW9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Brf2Q3UAW9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms