Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.38■□□□□ 0.37
Col10a1Q05306 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.38■□□□□ 0.37
Col10a1Q05306 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Col10a1Q05306 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.38■□□□□ 0.37
Col10a1Q05306 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col10a1Q05306 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col10a1Q05306 Gm26571-201ENSMUST00000181399 666 ntBASIC17.37■□□□□ 0.37
Col10a1Q05306 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col10a1Q05306 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col10a1Q05306 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Col10a1Q05306 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col10a1Q05306 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col10a1Q05306 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col10a1Q05306 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Gm13146-201ENSMUST00000118508 780 ntBASIC17.35■□□□□ 0.37
Col10a1Q05306 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.35■□□□□ 0.37
Col10a1Q05306 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col10a1Q05306 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col10a1Q05306 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.34■□□□□ 0.37
Col10a1Q05306 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col10a1Q05306 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 AV356131-201ENSMUST00000206201 750 ntBASIC17.34■□□□□ 0.37
Col10a1Q05306 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.34■□□□□ 0.37
Col10a1Q05306 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col10a1Q05306 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col10a1Q05306 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col10a1Q05306 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col10a1Q05306 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col10a1Q05306 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col10a1Q05306 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col10a1Q05306 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Col10a1Q05306 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col10a1Q05306 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Col10a1Q05306 Gm42569-201ENSMUST00000200539 472 ntBASIC17.33■□□□□ 0.36
Col10a1Q05306 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.33■□□□□ 0.36
Col10a1Q05306 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col10a1Q05306 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col10a1Q05306 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Col10a1Q05306 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col10a1Q05306 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Col10a1Q05306 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.32■□□□□ 0.36
Col10a1Q05306 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.32■□□□□ 0.36
Col10a1Q05306 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.32■□□□□ 0.36
Col10a1Q05306 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col10a1Q05306 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col10a1Q05306 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.31■□□□□ 0.36
Col10a1Q05306 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Col10a1Q05306 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.31■□□□□ 0.36
Col10a1Q05306 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col10a1Q05306 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col10a1Q05306 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col10a1Q05306 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col10a1Q05306 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col10a1Q05306 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms