Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sox2P48432 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.69■□□□□ 0.42
Sox2P48432 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.69■□□□□ 0.42
Sox2P48432 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.69■□□□□ 0.42
Sox2P48432 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sox2P48432 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sox2P48432 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox2P48432 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.68■□□□□ 0.42
Sox2P48432 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sox2P48432 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sox2P48432 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sox2P48432 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.68■□□□□ 0.42
Sox2P48432 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Sox2P48432 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sox2P48432 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sox2P48432 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox2P48432 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.68■□□□□ 0.42
Sox2P48432 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Serp2-204ENSMUST00000228055 705 ntBASIC17.67■□□□□ 0.42
Sox2P48432 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.67■□□□□ 0.42
Sox2P48432 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox2P48432 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Sox2P48432 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox2P48432 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox2P48432 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox2P48432 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.66■□□□□ 0.42
Sox2P48432 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox2P48432 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sox2P48432 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox2P48432 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sox2P48432 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.65■□□□□ 0.42
Sox2P48432 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sox2P48432 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox2P48432 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sox2P48432 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.64■□□□□ 0.41
Sox2P48432 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.64■□□□□ 0.41
Sox2P48432 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.64■□□□□ 0.41
Sox2P48432 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sox2P48432 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sox2P48432 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox2P48432 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
Sox2P48432 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox2P48432 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox2P48432 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox2P48432 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Sox2P48432 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms