Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tpm3P21107 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Tpm3P21107 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tpm3P21107 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tpm3P21107 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Tpm3P21107 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.22■□□□□ 0.99
Tpm3P21107 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.22■□□□□ 0.99
Tpm3P21107 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.22■□□□□ 0.99
Tpm3P21107 Gm43566-201ENSMUST00000196851 808 ntBASIC21.22■□□□□ 0.99
Tpm3P21107 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tpm3P21107 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tpm3P21107 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.21■□□□□ 0.99
Tpm3P21107 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.21■□□□□ 0.99
Tpm3P21107 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.21■□□□□ 0.99
Tpm3P21107 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tpm3P21107 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tpm3P21107 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.2■□□□□ 0.98
Tpm3P21107 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.2■□□□□ 0.98
Tpm3P21107 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tpm3P21107 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.19■□□□□ 0.98
Tpm3P21107 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.19■□□□□ 0.98
Tpm3P21107 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tpm3P21107 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.18■□□□□ 0.98
Tpm3P21107 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.18■□□□□ 0.98
Tpm3P21107 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tpm3P21107 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.17■□□□□ 0.98
Tpm3P21107 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.17■□□□□ 0.98
Tpm3P21107 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm3P21107 Gm10232-201ENSMUST00000089221 720 ntBASIC21.17■□□□□ 0.98
Tpm3P21107 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm3P21107 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tpm3P21107 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Tpm3P21107 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tpm3P21107 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.16■□□□□ 0.98
Tpm3P21107 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.16■□□□□ 0.98
Tpm3P21107 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tpm3P21107 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tpm3P21107 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.15■□□□□ 0.98
Tpm3P21107 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tpm3P21107 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms