Protein–RNA interactions for Protein: P10820

Prf1, Perforin-1, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prf1P10820 Gm12527-201ENSMUST00000117967 564 ntBASIC19.43■□□□□ 0.7
Prf1P10820 Gm8520-201ENSMUST00000186517 868 ntBASIC19.43■□□□□ 0.7
Prf1P10820 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Prf1P10820 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.43■□□□□ 0.7
Prf1P10820 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Prf1P10820 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prf1P10820 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prf1P10820 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prf1P10820 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prf1P10820 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prf1P10820 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prf1P10820 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prf1P10820 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prf1P10820 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prf1P10820 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prf1P10820 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prf1P10820 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prf1P10820 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.41■□□□□ 0.7
Prf1P10820 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.4■□□□□ 0.7
Prf1P10820 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.4■□□□□ 0.7
Prf1P10820 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.4■□□□□ 0.7
Prf1P10820 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.4■□□□□ 0.7
Prf1P10820 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prf1P10820 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Prf1P10820 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.39■□□□□ 0.69
Prf1P10820 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.39■□□□□ 0.69
Prf1P10820 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prf1P10820 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.38■□□□□ 0.69
Prf1P10820 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prf1P10820 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prf1P10820 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.38■□□□□ 0.69
Prf1P10820 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.38■□□□□ 0.69
Prf1P10820 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prf1P10820 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prf1P10820 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prf1P10820 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prf1P10820 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prf1P10820 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Prf1P10820 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prf1P10820 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Prf1P10820 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.37■□□□□ 0.69
Prf1P10820 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.37■□□□□ 0.69
Prf1P10820 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prf1P10820 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.37■□□□□ 0.69
Prf1P10820 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prf1P10820 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Prf1P10820 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prf1P10820 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.36■□□□□ 0.69
Prf1P10820 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.36■□□□□ 0.69
Prf1P10820 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prf1P10820 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Prf1P10820 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.35■□□□□ 0.69
Prf1P10820 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prf1P10820 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms