Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm5878E9PUB3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm5878E9PUB3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Gm21956-201ENSMUST00000179946 522 ntBASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm5878E9PUB3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gm8493-201ENSMUST00000196881 489 ntBASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gm43173-201ENSMUST00000202246 593 ntBASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm5878E9PUB3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Gm5878E9PUB3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Gm12821-201ENSMUST00000120022 600 ntBASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.14□□□□□ -0.15
Gm5878E9PUB3 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm5878E9PUB3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Gm5878E9PUB3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms